tooluniverse-gwas-snp-interpretation

Interpret a single GWAS SNP across multiple databases : GWAS Catalog hits.

What this skill does for you

Interpret a single GWAS SNP across multiple databases : GWAS Catalog hits, LD/haplotype context, eQTL evidence, regulatory annotation, ClinVar pathogenicity, gnomAD frequency. Use for 'what does this SNP do', SNP-to-mechanism tracing, and resolving lead-SNP-vs-causal-variant ambiguity. Always considers LD structure before claiming a SNP is mechanistically responsible.

Quoted from the skill description in the pinned source

Who made it

Publishermims-harvard

Repositorytooluniverse

Installs364as of Sep 27, 2026

Use it with Edge

Set up Edge for me: read getedge.cc/SKILL.md and follow it. Then use Edge to load the tooluniverse-gwas-snp-interpretation skill from mims-harvard/tooluniverse.

Paste it into Claude, ChatGPT, Codex or Cursor.

Or read the skill source first.

Security evidence

Security state at 2026-09-30: reviewed. State definitions. This records static evidence for this revision; live load eligibility is checked again.

3 static scans, 0 counted findings. The listed scanners recorded the results shown for this package revision.

Scanner	Date	Result
Edge static checks	2026-09-27	Pass
Cisco skill-scanner	2026-09-27	Pass
Semgrep Edge rules	2026-09-27	Pass

Static scans check the code, not how well the skill works.

Scanner scope, raw findings and mirrored provider records

Edge static checks (Edge-run): edge-static/1.0.1. Scope: Static patterns for remote execution, credentials with network sends, obfuscation, prompt overrides, hidden Unicode, binaries and persistence. Revision: 40aabf8fbe7b153061f76eeb4be70415dc6f1126. Raw findings: . Counted findings: .

Cisco skill-scanner (Edge-run): cisco-skill-scanner/2.1.0. Scope: Local static, YARA, pipeline and behavioral analyzers; no LLM or AI Defense analysis. Revision: 40aabf8fbe7b153061f76eeb4be70415dc6f1126. Raw findings: 2. Counted findings: .

Semgrep Edge rules (Edge-run): semgrep/1.178.0+edge-rules.c15016a36fd3+offline-v1. Scope: Six Edge-authored static rules with Semgrep CE; offline execution and metrics disabled. Semgrep-maintained rules excluded. Revision: 40aabf8fbe7b153061f76eeb4be70415dc6f1126. Raw findings: . Counted findings: .

Source and licence

Repository: https://github.com/mims-harvard/tooluniverse
Pinned skill file: View source at revision
Revision: 40aabf8fbe7b153061f76eeb4be70415dc6f1126
Package hash: sha256:3bc046ace68d543161be50231011db573f5ec505fb56516278a00bcb9c9e46d3
Licence: Apache-2.0